Related Links

FlowJo Analysis Software

Probably the best way to analyze data is using FlowJo.  It is specifically designed for analyzing FACS data (.fcs extensions) and allows more complete and accurate interpretation of data.  It is fairly easy to use, but certainly requires more know how than FACSDiva software.  Try it Free!

BD FACSAria Users Guide

Get familiar with the instrument.  Here is the guide to the Aria including information about its components as well as how to use it properly.

What is Flow Cytometry?

This is a Nature Review of Flow Cytometry.  It is great for newer users to understand the concept of Flow Cytometry and its applications, as well as understanding a bit about the readout of a flow cytometer.

Current Protocols in Flow Cytometry

Is there information on how to do the experiment you are trying to design? Check here.

Compensation Overview

Here is a site that was designed to introduce new users to the concept of comensation, as well as provide a couple of quizzes to test your knowledge. 

BD FACSDiva software quick start guide

In order to collect and analyze data, you will need to be familiar with FACS Diva software.

Flow Cytometry on the Web

Didn’t find a link to  what you were looking for yet?  If it exists, you can get to it from here...

FACS Core Facility at SDSU

Text Box: San Diego State University
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BD Spectra Viewer

This is a great tool that you can use to optimize your experiments.  By setting up the plugin to the configuration of our instruments, you can view the excitation and emission spectrums of most well known fluorochromes, and set up your experiment to separate your colors as much as possible.  It also is helpful for newer users to get familiar with the concept of multiple channels and excitation emission relationships.

BD/Ingenuity Pathway Explorer

Want to know more about cell signaling pathways or related proteins?  This is an amazing new tool that allows you to explore protein relationships and pathways.  Just click on a protein to learn more